Pfaff Lab
Pfaff Lab
Principal Investigator
Sam-Pfaff-20240712-551A0223-767×767

Sam Pfaff

Professor
Benjamin H. Lewis Chair in Neuroscience

Dr. Samuel Pfaff is a Professor at the Salk Institute for Biological Studies where he first started as a PI in 1996. At the Salk he is the head of the Goldman Laboratory for Neural Circuit Dynamics in the Gene Expression Laboratory and the Benjamin H. Lewis Chair in Neuroscience. He holds adjunct appointments with the Biology, Biomedical Sciences, Neuroscience, and Bioengineering programs. Dr. Pfaff received his B.A. in Biology from Carleton College and his Ph.D. in Molecular Biology from the University of California, Berkeley. His post-doctoral training was done at Vanderbilt University with Dr. William Taylor on gene regulation, and at Columbia University with Dr. Thomas Jessell on neural development. He is the recipient of the Javits Neuroscience Investigator Award, McKnight Scholar Award, PEW Scholar Award, March of Dimes Basil O’Connor Scholar Award, Whitehall Foundation Scholar Award, Alfred P. Sloan Research Fellow Award, Fellow of the American Association for the Advancement of Science (AAAS), and has been a Howard Hughes Medical Institute Investigator.

Making the most of opportunities and challenges »

Meet Salk Scientists »

Pfaff CV

Research Scientists
Carolina-Perez-20240712-551A0478-767×767

Carolina Thörn Perez

Senior Research Scientist

Background: PhD, Neuroscience, Karolinska Institutet, Sweden Postdoctoral fellow, Karolinska Institutet, Sweden Postdoctoral fellow, UCLA, USA Research Associate, McGill, Canada
Project/Techniques: Animal movement is a dynamic process that enables adaptation to environmental changes, driven by the complex organization of neural circuits. Our research aims to uncover the principles and functional processes within these circuits that control behavior under physiological and pathophysiological conditions. To address our specific questions, I use genetically modified mice, employing cutting-edge techniques such as functional imaging, electrophysiology, pharmacology, anatomy, and behavioral analysis.
20240712-551A0305sq

Shawn Driscoll

Bioinformatics Analyst III

Kip-Hermann-20240712-551A0251-767×767

Kip Hermann

Research Scientist

Background: PhD, Molecular and Medical Pharmacology, UCLA Postdoctoral fellow, UCLA Postdoctoral fellow, The Scripps Institute
Project/Techniques: Gene therapy techniques can often be hindered by limitations to the technology used, such as limitations to transgene size by vectors, inability to modulate the expression of the transgenes, and lack of transgene expression based of the presence of other RNA.  Our lab uses knowledge of multiple splicing platforms and their ability to interact to address these limitations to the gene therapy field.  With the help of these splicing platforms, we have developed methods to 1) deliver larger transgenes using vectors that have a limit to nucleic acid capacity, 2) modulate transgene expression using compounds, and 3) initiate transgene expression mediated by the presence of specific endogenous RNA.
Lab Manager
Karen-Lettieri-20240712-551A0396

Karen Lettieri

Lab Manager

Background:  B.S. General Biology, University of California San Diego  
Research Assistants
Cindy-Alvarez-20240712-551A0336-767×767

Cindy Alvarez

Research Assistant I

Background: B.S. Human Biology, UCSD, La Jolla, CA Lab Assistant, Villarreal-UCSD, La Jolla, CA Lab Intern, Reveal Biosciences, San Diego, CA
Claire-Williams-20240712-551A0547-767×767

Claire Williams

Research Assistant I

Background: Lab Tech, Salk Institute, La Jolla
Project/Techniques: The limited capacity of Adeno-Associated Viruses (AAVs) for delivering constructs in gene therapies has been a challenge for many in the field. Various strategies have been developed to overcome these capacity limitations, including the use of inteins, DNA recombination, and truncated coding sequences. My work involves utilizing the novel RNA End Joining (REJ) technology developed in the Pfaff Lab for the viral delivery of gene therapies targeting Usher Syndrome Type 1F, while also contributing to our Duchenne Muscular Dystrophy (DMD) therapy project.
Postdoctoral Fellows
Peter-Osseward-20240712-551A0328-767×767

Peter Osseward

Postdoctoral Fellow

Background: Ph.D, Neurosciences Graduate Program, University of California San Diego B.A. in Biochemistry, Biophysics, & Molecular Biology and B.A. in Philosophy, Whitman College
Project/Techniques: My research questions have focused on understanding the principles that account for neural diversity within the spinal cord. To address these questions, we use single cell RNA sequencing, spatial transcriptomics, and bioinformatics in conjunction with transgenic mice and neuronal circuit tracing techniques.
Gokhan-Senturk-20230922-551A7159-767×767

Gökhan Senturk

Postdoctoral Fellow

Background: BSc, Bilkent University, Turkey (Molecular Biology and Genetics) PhD, University of California, San Diego (Biological Sciences)
Project/Techniques: Contrary to the common belief that the sympathetic nervous system functions in an all-or-none manner, eliciting a fight-or-flight response, emerging evidence indicates a more nuanced physiological regulation where different effector organs are independently controlled. My research program aims to identify the cellular and circuit mechanisms that enable this selective control. To address our specific questions, we use circuit tracing and molecular characterization tools to explore the connectivity and specific cell types involved in this process.
Graduate Students
Bianca-Barriga-20240712-551A0262-767×767

Bianca Barriga

Graduate Student

Vaidehi-Gupta-20240712-551A0506-sm

Vaidehi Gupta

Graduate Student

Background: BS/ BA, Neuroscience/ Classical Studies, University of California San Diego, USA
Project/Techniques: I am interested in understanding how different aspects of locomotion and motor behavior are controlled by genetically defined cell types in the spinal cord. I am addressing this question using a combination of optogenetics, chemogenetics, behavior assays, immunohistochemistry, confocal imaging and of course, our lab’s specialty – intersectional mouse genetics!
Ryan-Hsu-20240712-551A0361-767×767

Ryan Hsu

Graduate Student

Background: UC Berkeley
Projects/Techniques: I work on development and in vivo validation of AAV genetic therapies for Duchenne muscular dystrophy using our lab’s RNA End-Joining technology

Ben Temple

Graduate Student

Education: BA, Yale, Philosophy Research Focus: Neural control of movement
Administrative Assistant
Beverly-Kennedy-20240712-551A0601rtsq

Beverly Kennedy

Research Administrative Assistant

Developed strong organizational skills and a deep understanding of research administration and project coordination. Transitioned into this role at Salk Institute in 2020 after 30 years of experience at the Scripps Institution of Oceanography.